contourRun Class Reference

#include <CINNIC/contourRun.H>

Collaboration diagram for contourRun:

[legend]List of all members.

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Detailed Description

Run the hyper column on a given image with a given connection template.

This is the central iterative process to CINNIC. It takes as input a 3D ImageMap and a 4D PropHold made from ContourNeuronCreate. It matches each neuron in the hyper column against each other neuron in the hyper column. Energy is tranfered to the other neuron based on a product of the two neurons current exitation from the ImageMap and the weight of thier connections. A negative weight signifies inhabition. Energys are allowed to build iteratively in an upper layer SalMap built into this class.

Definition at line 95 of file contourRun.H.

Public Member Functions
	contourRun ()
	~contourRun ()
void	copyCombinedSalMap (std::vector< Image< float > > &CSM)
	copy the combined sal map to this class for analysis or dumping
void	setArraySize (long size)
	set the storage array size for linear components in subsq. iteration
Image< float >	getSMI (int iter)
	returned the processed salmap for this object at iter
void	setIterations (int iter)
	set number of iterations
void	deriveEnergy ()
	find the time to total energy ratio
void	dumpEnergySigmoid (const char *filename, const char *savefile, readConfig &config, Image< float > image, int scaleNo, int scaleTot)
	Dump energy values computed with sigmoidal process.
void	contourRunMain (std::vector< Image< float > > &imageMap, ContourNeuronCreate< float > &N, readConfig &config, Image< float > &group, int groups, int iter, float groupTop)
	This is a short cut method to run runImage + other methods.
Public Attributes
long	iterCounter

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Member Function Documentation

void contourRun::contourRunMain (  std::vector< Image< float > > &  imageMap, ContourNeuronCreate< float > &  N, readConfig &  config, Image< float > &  group, int  groups, int  iter, float  groupTop )

This is a short cut method to run runImage + other methods. This will run setConfig setImageSize, resetMatrix and runImage for you. Parameters: Image  the processed image map of orientations from ImageMap N  This is the generic neuron template from ContourNeuronCreate config  This is the config file object from readConfig.C sizeX  The size of the image in X sizeY  The size of the image in Y Definition at line 535 of file contourRun.C. References iterCounter.

void contourRun::copyCombinedSalMap (  std::vector< Image< float > > &  CSM  )

copy the combined sal map to this class for analysis or dumping Definition at line 77 of file contourRun.C.

void contourRun::deriveEnergy (   )

find the time to total energy ratio find the max energy per time slice, timestep is 1/x seconds where x = timestep Definition at line 218 of file contourRun.C.

void contourRun::dumpEnergySigmoid (  const char *  filename, const char *  savefile, readConfig &  config, Image< float >  image, int  scaleNo, int  scaleTot )

Dump energy values computed with sigmoidal process. Parameters: filename  The base name to give this file, should include path savefile  The tailend of the file name readConfig  the config file object Definition at line 145 of file contourRun.C. References ASSERT, Image< T >::getHeight(), Image< T >::getWidth(), i, LINFO, out, overlayStain(), rescale(), Image< T >::resize(), Image< T >::setVal(), sformat(), Raster::WriteRGB(), x, and y.

Image< float > contourRun::getSMI (  int  iter  )

returned the processed salmap for this object at iter Definition at line 71 of file contourRun.C.

void contourRun::setArraySize (  long  size  )

set the storage array size for linear components in subsq. iteration Definition at line 115 of file contourRun.C.

void contourRun::setIterations (  int  iter  )

set number of iterations Definition at line 209 of file contourRun.C. References ASSERT.

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The documentation for this class was generated from the following files:

• src/CINNIC/contourRun.H
• src/CINNIC/contourRun.C

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